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In zoology and developmental anatomy , the notochord is an elastic, rod-like anatomical structure found in animals of the phylum Chordata . A notochord is one of five synapomorphies , or shared derived characteristics, used to identify a species as a chordate.

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59-422: In vertebrate anatomy , the throat is the front part of the neck , internally positioned in front of the vertebrae . It contains the pharynx and larynx . An important section of it is the epiglottis , separating the esophagus from the trachea (windpipe), preventing food and drinks being inhaled into the lungs . The throat contains various blood vessels , pharyngeal muscles , the nasopharyngeal tonsil ,

118-549: A backbone or spine, consisting of vertebrae and intervertebral discs . The vertebrae are irregular bones , and the intervertebral discs are of fibrocartilage . The vertebral column surrounds and protects the spinal cord . The other feature unique to vertebrates is the presence of a cranium , or skull. The vertebrates make up the subphylum Vertebrata with some 65,000 species in the phylum Chordata . The vertebrates include mammals , birds , amphibians , and various classes of reptiles and fish . Classes of fish include

177-427: A jaw , hyoid and/or the middle ear ossicles . An iodine-concentrating organ called the endostyle , which functions as a filter feeding organ in aquatic animals has evolved into the thyroid in most vertebrates. Vertebrates vary in body length ranging from the frog species Brachycephalus pulex , a Brazilian flea toad, with a minimum adult snout–vent length of 6.45 millimetres (0.254 in) to

236-417: A central nervous system arising from a single nerve cord dorsal to the gut tube , headed by a series of (typically paired) brain vesicles, is unique to vertebrates. This is in stark contrast to invertebrates with well-developed central nervous systems such as arthropods and cephalopods , which have an often ladder-like ventral nerve cord made of paired segmental ganglia on the opposite ( ventral ) side of

295-528: A common lineal origin, it is now viewed as analogous, convergent , or from a different lineal origin. Pikaia appears to have a proto-notochord, and notochords are present in several basal chordates such as Haikouella , Haikouichthys , and Myllokunmingia , all from the Cambrian . The Ordovician oceans included many diverse species of Agnatha and early Gnathostomata which possessed notochords, either with attached bony elements or without, most notably

354-410: A critical role in signaling the development of motor neurons. The secretion of SHH by the notochord establishes the ventral pole of the dorsal-ventral axis in the developing embryo. The notochord is the defining feature ( synapomorphy ) of chordates , and was present throughout life in many of the earliest chordates. Although the stomochord of hemichordates was once thought to be homologous or from

413-525: A hollow neural tube ) running along the dorsal aspect of the notochord . Of particular importance and unique to vertebrates is the presence of neural crest cells, which are progenitor cells critical to coordinating the functions of cellular components. Neural crest cells migrate through the body from the dorsal nerve cord during development, initiate the formation of neuronal ganglia and various special sense organs. The peripheral nervous system forms when neural crest cells branch out laterally from

472-464: A homologous structure, the axochord, that was present in annelid-like ancestors of the chordates). Deciding between these two scenarios (or possibly another yet to be proposed) should be facilitated by much more thorough studies of gene regulatory networks in a wide spectrum of animals. In most vertebrates, the notochord develops into secondary structures. In other chordates , the notochord is retained as an essential anatomical structure. The evolution of

531-589: A protein related to ubiquitin carboxyl-terminal hydrolase are exclusively shared by all vertebrates and reliably distinguish them from all other animals. A specific relationship between vertebrates and tunicates is strongly supported by two CSIs found in the proteins Rrp44 (associated with the exosome complex ) and serine palmitoyltransferase . These are exclusively shared by species from these two subphyla, but not cephalochordates . This indicates hat vertebrates are more closely related to tunicates than cephalochordates. The "Notochordata hypothesis" suggested that

590-420: A second notochord near the dorsal neural tube, 180 degrees opposite of the normal notochord location, one can induce the formation of motor neurons in the dorsal tube. Motor neuron formation generally occurs in the ventral neural tube, while the dorsal tube generally forms sensory cells . The notochord secretes a protein called sonic hedgehog (SHH), a key morphogen regulating organogenesis and having

649-606: A series of crescentic openings from the pharynx to the outside. Each gill is supported by a cartilaginous or bony gill arch , which develop embryonically from pharyngeal arches . Bony fish have three pairs of gill arches, cartilaginous fish have five to seven pairs, while the primitive jawless fish have seven pairs. The ancestral vertebrates likely had more arches than seven, as some of their chordate relatives have more than 50 pairs of gill opens, although most, if not all, of these openings are actually involved in filter feeding rather than respiration . In jawed vertebrates ,

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708-432: Is a transient structure ventral to the notochord, and is primarily responsible for correct development of the dorsal aorta. Notochord flexion , when the notochord bends to form a part of the developing caudal fin, is a hallmark of an early growth stage of some fish. By the age of 4, all notochord residue is replaced by a population of chondrocyte -like cells of unclear origin. Persistence of notochordal cells within

767-410: Is derived from the embryonic mesoderm and consists of an inner core of vacuolated cells filled with glycoproteins , covered by two helical collagen - elastin sheaths. It lies along the rostral - caudal axis of the body (i.e. longitudinally or " head to tail "), dorsal to the gut tube and ventral to the dorsal nerve cord . Some chordates, such as tunicates , develop notochord during

826-419: Is found ventral to the neural tube . Notogenesis is the development of the notochord by epiblasts that form the floor of the amnion cavity. The progenitor notochord is derived from cells migrating from the primitive node and pit. The notochord forms during gastrulation and soon after induces the formation of the neural plate ( neurulation ), synchronizing the development of the neural tube . On

885-440: Is found in invertebrate chordates such as lancelets (a sister subphylum known as the cephalochordates ), though it lacks eyes and other complex special sense organs comparable to those of vertebrates. Other chordates do not show any trends towards cephalization. The rostral end of the neural tube is expanded by a thickening of the walls and expansion of the central canal of spinal cord into three primary brain vesicles :

944-449: Is found in the nucleus pulposus of the intervertebral discs. Isolated notochordal remnants may escape their lineage-specific destination in the nucleus pulposus and instead attach to the outer surfaces of the vertebral bodies , from which notochordal cells largely regress. During development of amphibians and fish, the notochord induces development of the hypochord through secretion of vascular endothelial growth factor . The hypochord

1003-635: The Cephalochordata is the sister taxon to Craniata (Vertebrata). This group, called the Notochordata, was placed as sister group to the Tunicata (Urochordata). Studies since 2006 analyzing large sequencing datasets however strongly support Olfactores (tunicates + vertebrates) as a clade, and hence the placement of Cephalochordata as sister-group to Olfactores (known as the " Olfactores hypothesis "). The following cladogram summarizes

1062-559: The Chengjiang biota and lived about 518 million years ago. These include Haikouichthys , Myllokunmingia , Zhongjianichthys , and probably Haikouella . Unlike the other fauna that dominated the Cambrian, these groups had the basic vertebrate body plan: a notochord, rudimentary vertebrae, and a well-defined head and tail. All of these early vertebrates lacked jaws in the common sense and relied on filter feeding close to

1121-474: The Izu–Ogasawara Trench at a depth of 8,336 metres (27,349 feet). Many fish varieties are the main predators in most of the world's freshwater and marine water bodies . The rest of the vertebrate species are tetrapods, a single lineage that includes amphibians (with roughly 7,000 species); mammals (with approximately 5,500 species); and reptiles and birds (with about 20,000 species divided evenly between

1180-633: The Jurassic . The Cenozoic world saw great diversification of bony fishes, amphibians, reptiles, birds and mammals. Over half of all living vertebrate species (about 32,000 species) are fish (non-tetrapod craniates), a diverse set of lineages that inhabit all the world's aquatic ecosystems, from the Tibetan stone loach ( Triplophysa stolickai ) in western Tibetan hot springs near Longmu Lake at an elevation of 5,200 metres (17,100 feet) to an unknown species of snailfish (genus Pseudoliparis ) in

1239-464: The Latin vertebratus ("jointed"), from vertebra meaning "joint", in turn from Latin vertere to turn. All vertebrates are built along the basic chordate body plan of five synapomorphies . These are a rigid axial skeleton that includes a vertebral column developed around an elastic notochord . The notochord becomes the intervertebral discs , and runs dorsally to the gut tube along

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1298-574: The Placodermi and the Acanthodii , both considered paraphyletic . Other ways of classifying the vertebrates have been devised, particularly with emphasis on the phylogeny of early amphibians and reptiles. An example based on Janvier (1981, 1997), Shu et al. (2003), and Benton (2004) is given here († = extinct ): While this traditional classification is orderly, most of the groups are paraphyletic , i.e. do not contain all descendants of

1357-840: The Tree of Life Web Project and Delsuc et al., and complemented (based on, and ). A dagger (†) denotes an extinct clade , whereas all other clades have living descendants . Hyperoartia ( lampreys ) [REDACTED] Myxini ( hagfish ) [REDACTED] † Euconodonta [REDACTED] † Myllokunmingiida [REDACTED]   † Pteraspidomorphi [REDACTED] † Thelodonti [REDACTED] † Anaspida [REDACTED] † Galeaspida [REDACTED] † Pituriaspida [REDACTED] † Osteostraci [REDACTED]   † Antiarchi [REDACTED] † Petalichthyida [REDACTED] † Arthrodira [REDACTED] † Ptyctodontida [REDACTED] † Entelognathus   [REDACTED]   Notochord The notochord

1416-399: The blue whale , at up to 33 m (108 ft). With only one exception, the defining characteristic of all vertebrates is the vertebral column , in which the embryonic notochord found in all chordates is replaced by a segmented series of mineralized elements called vertebrae separated by fibrocartilaginous intervertebral discs , which are embryonic and evolutionary remnants of

1475-423: The conodonts , placoderms , and ostracoderms . Even after the evolution of the vertebral column in chondrichthyes and osteichthyes , these taxa remained common and are well represented in the fossils record. Several species (see list below) have reverted to the primitive state, retaining the notochord into adulthood, though the reasons for this are not well understood. Scenarios for the evolutionary origin of

1534-565: The genetics of organisms. Phylogenetic classification is based solely on phylogeny . Evolutionary systematics gives an overview; phylogenetic systematics gives detail. The two systems are thus complementary rather than opposed. Conventional classification has extant vertebrates grouped into seven classes based on traditional interpretations of gross anatomical and physiological traits. The commonly held classification lists three classes of fish and four of tetrapods . In addition to these, there are two classes of extinct armoured fishes,

1593-545: The gut tube and ventral to the neural tube . The notochord is composed primarily of a glycoproteins core that is encased in a sheath of collagen fibers. This is wound into two opposing helices . The glycoproteins are stored in vacuolated, turgid cells, which are covered with caveolae on their cell surface. The angle between these fibers determines whether increased pressure in the core will result in shortening and thickening versus lengthening and thinning. Alternating contraction of muscle fibers attached to each side of

1652-403: The larval stage but lose it through subsequent stages into adulthood. The notochord is important for signaling the dorso-ventral patterning of cells coming from the mesodermal progenitors. This helps form the precursors needed for certain organs and the embryo to develop. In summary, the notochord plays essential roles in embryonic development. The notochord provides a directional reference to

1711-412: The mesoderm , which grows medially and surrounds it. From the mesoderm surrounding the neural tube and notochord, the skull , vertebral column, and the membranes of the brain and medulla spinalis are developed. Because it originates from the primitive node and is ultimately positioned with the mesodermal space, it is considered to be derived from mesoderm. A postembryonic vestige of the notochord

1770-410: The prosencephalon ( forebrain ), mesencephalon ( midbrain ) and rhombencephalon ( hindbrain ), which are further differentiated in the various vertebrate groups. Two laterally placed retinas and optical nerves form around outgrowths from the midbrain, except in hagfish which may have secondarily lost the structures. The forebrain is more well-developed in most tetrapods and subdivided into

1829-432: The telencephalon and diencephalon , while the midbrain dominates in fish and some salamanders . In vertebrates with paired appendages, especially tetrapods, a pair of secondary enlargements of the hindbrain become the cerebella , which modulate complex motor coordinations . The brain vesicles are usually bilaterally symmetrical , giving rise to the paired cerebral hemispheres in mammals . The resultant anatomy of

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1888-428: The tonsils , the palatine uvula , the trachea, the esophagus , and the vocal cords . Mammal throats consist of two bones , the hyoid bone and the clavicle . The "throat" is sometimes thought to be synonymous for the fauces . It works with the mouth, ears and nose , as well as a number of other parts of the body. Its pharynx is connected to the mouth, allowing speech to occur, and food and liquid to pass down

1947-410: The ventral aspect of the neural groove, an axial thickening of the endoderm takes place. (In bipedal chordates, e.g. humans, this surface is properly referred to as the anterior surface). This thickening appears as a furrow (the chordal furrow) the margins of which anastomose (come into contact), and so convert it into a solid rod of polygonal-shaped cells (the notochord) which is then separated from

2006-434: The adult animal, and the notochord is not vacuolated. In all vertebrates other than the hagfish , the notochord is present only during early embryonic development and is later replaced by the bony and/or cartilaginous vertebral column , with its original structure being integrated into the intervertebral discs as the nucleus pulposus . The notochord is a long, rod-like midline structure that develops dorsal to

2065-418: The axial endoskeleton (enclosed by protective skeletal extensions known as neural arches ), with a fore-end enlargement that is contained within a distinct skeletonized braincase (hence the alternative name for vertebrates, the craniates ). All vertebrate embryos develop transient pharyngeal arches , which in fish develop into the branchial arches that support the gills . Other vertebrate features are

2124-427: The brain (which itself is a fused cluster of segmental ganglia from the rostral metameres ). Molecular markers known as conserved signature indels (CSIs) in protein sequences have been identified and provide distinguishing criteria for the vertebrate subphylum. Specifically, 5 CSIs in the following proteins: protein synthesis elongation factor-2 , eukaryotic translation initiation factor 3 , adenosine kinase and

2183-409: The class's common ancestor. For instance, descendants of the first reptiles include modern reptiles, mammals and birds; the agnathans have given rise to the jawed vertebrates ; the bony fishes have given rise to the land vertebrates ; the traditional " amphibians " have given rise to the reptiles (traditionally including the synapsids or mammal-like "reptiles"), which in turn have given rise to

2242-556: The demise of virtually all jawless fishes save for lampreys and hagfishes, as well as the Placodermi , a group of armoured fish that dominated the entirety of that period since the late Silurian as well as the eurypterids , dominant animals of the preceding Silurian , and the anomalocarids . By the middle of the Devonian, several droughts, anoxic events and oceanic competition led a lineage of sarcopterygii to leave water, eventually establishing themselves as terrestrial tetrapods in

2301-408: The dorsal nerve cord and migrate together with the mesodermal somites to innervate the various different structures that develop in the body. The vertebrates are the only chordate group with neural cephalization , and their neural functions are centralized towards a series of enlarged clusters in the head , which give rise to a brain . A slight swelling of the anterior end of the nerve cord

2360-399: The endoderm. In vertebrates, it extends throughout the entire length of the future vertebral column, and reaches as far as the anterior end of the midbrain , where it ends in a hook-like extremity in the region of the future dorsum sellae of the sphenoid bone . Initially, it exists between the neural tube and the endoderm of the yolk-sac; soon, the notochord becomes separated from them by

2419-483: The first gill arch pair evolved into the jointed jaws and form an additional oral cavity ahead of the pharynx . Research also suggests that the sixth branchial arch contributed to the formation of the vertebrate shoulder, which separated the head as a distinct part of the body. In amphibians and some primitive bony fishes, the larvae bear external gills , branching off from the gill arches. These are reduced in adulthood, their respiratory function taken over by

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2478-421: The gill arches form during fetal development , and form the basis of essential structures such as jaws , the thyroid gland , the larynx , the columella (corresponding to the stapes in mammals ) and, in mammals, the malleus and incus . The central nervous system of vertebrates is based on the embryonic dorsal nerve cord (which then flattens into a neural plate before folding and fusing over into

2537-400: The gut tube, with a split brain stem circumventing the foregut around each side to form a brain on the dorsal side of the mouth . The higher functions of the vertebrate CNS are highly centralized towards the brain (particularly the forebrain), while the invertebrate CNS is significantly more decentralized with the segmental ganglia having substantial neural autonomy independent of

2596-443: The internal gills proper in fishes and by cutaneous respiration in most amphibians. While some amphibians such as axolotl retain the external gills into adulthood, the complex internal gill system as seen in fish apparently being irrevocably lost very early in the evolution of tetrapods , who evolved lungs (which are homologous to swim bladders ) to breathe air. While the more specialized terrestrial vertebrates lack gills,

2655-407: The jawless Agnatha , and the jawed Gnathostomata . The jawed fish include both the cartilaginous fish and the bony fish . Bony fish include the lobe-finned fish , which gave rise to the tetrapods , the animals with four limbs. Vertebrates make up less than five percent of all described animal species ; the rest are all invertebrates , that lack a backbone. The word 'vertebrate' derives from

2714-432: The length of an animal, hence the common name of backbone. The axial endoskeleton typically continues beyond the anus / cloaca to form an elongated tail . Some vertebrates evolved to become tailless with only a vestigial coccyx . A dorsal nerve cord , which folds and fuses into a hollow neural tube during embryonic development and eventually gives rise to the brain and spinal cord , runs more dorsally to

2773-460: The mammals and birds. Most scientists working with vertebrates use a classification based purely on phylogeny , organized by their known evolutionary history and sometimes disregarding the conventional interpretations of their anatomy and physiology. In phylogenetics , the relationships between animals are illustrated as a hierarchy known as a phylogenetic tree . The cladogram below is based on studies compiled by Philippe Janvier and others for

2832-406: The notochord result in a side-to-side motion resembling stern sculling , which allows tail swimming and undulation . The stiffened notochord prevents movement through telescoping motion such as that of an earthworm . The notochord plays a key role in signaling and coordinating development. Embryos of modern vertebrates form transient notochord structures during gastrulation . The notochord

2891-423: The notochord were comprehensively reviewed by Annona, Holland, and D'Aniello (2015). They point out that, although many of these ideas have not been well supported by advances in molecular phylogenetics and developmental genetics, two of them have actually been revived under the stimulus of modern molecular approaches (the first proposes that the notochord evolved de novo in chordates, and the second derives it from

2950-400: The notochord within the phylum Chordata is considered in detail by Holland and Somorjai (2020). Vertebrates now have spines so they do not need a notochord. The following organisms retain a post-embryonic notochord: The notochord of the lancelet (amphioxus) protrudes beyond the anterior end of the neural tube. This projection serves a second purpose in allowing the animal to burrow within

3009-411: The notochord. Hagfish are the only extant vertebrate whose notochord persists and is not integrated/ replaced by the vertebral column. A few vertebrates have secondarily lost this feature and retain the notochord into adulthood, such as the sturgeon . Most vertebrates are aquatic and carry out gas exchange via gills . The gills are carried right behind the head, bordering the posterior margins of

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3068-554: The relationships between the Olfactores (vertebrates and tunicates) and the Cephalochordata.   Amphioxiformes (lancelets)  [REDACTED]   Tunicata /Urochordata ( sea squirts , salps , larvaceans )  [REDACTED]   Vertebrata   [REDACTED] Vertebrates originated during the Cambrian explosion , which saw a rise in organism diversity. The earliest known vertebrates belongs to

3127-661: The seabed. A vertebrate group of uncertain phylogeny, small eel-like conodonts , are known from microfossils of their paired tooth segments from the late Cambrian to the end of the Triassic. The first jawed vertebrates may have appeared in the late Ordovician (~445 mya) and became common in the Devonian period , often known as the "Age of Fishes". The two groups of bony fishes , the Actinopterygii and Sarcopterygii , evolved and became common. The Devonian also saw

3186-450: The subglottic larynx, in children it is the narrowest section of the upper part of the throat. The jugulum is a low part of the throat, located slightly above the breast. The term jugulum is reflected both by the internal and external jugular veins , which pass through the jugulum . Vertebrate anatomy Ossea Batsch, 1788 Vertebrates ( / ˈ v ɜːr t ə b r ɪ t s , - ˌ b r eɪ t s / ) are animals with

3245-650: The succeeding Carboniferous . Amniotes branched from amphibious tetrapods early in the Carboniferous period. The synapsid amniotes were dominant during the late Paleozoic, the Permian , while diapsid amniotes became dominant during the Mesozoic . In the sea, the teleosts and sharks became dominant. Mesothermic synapsids called cynodonts gave rise to endothermic mammals and diapsids called dinosaurs eventually gave rise to endothermic birds , both in

3304-432: The surrounding tissue as a midline structure during the embryonic development , acts as a precursor for vertebrae and a primitive axial endoskeleton , and can allow for facilitated tail motion when swimming. In cephalochordates ( lancelets ), the notochord persists throughout life as the main structural support of the body. In tunicates , the notochord is present only in the larval stage, becoming completely absent in

3363-446: The throat. It is joined to the nose by the nasopharynx at the top of the throat, and to the ear by its Eustachian tube . The throat's trachea carries inhaled air to the bronchi of the lungs. The esophagus carries food through the throat to the stomach . Adenoids and tonsils help prevent infection and are composed of lymph tissue. The larynx contains vocal cords, the epiglottis (preventing food/liquid inhalation), and an area known as

3422-402: The two classes). Tetrapods comprise the dominant megafauna of most terrestrial environments and also include many partially or fully aquatic groups (e.g., sea snakes , penguins , cetaceans). There are several ways of classifying animals. Evolutionary systematics relies on anatomy , physiology and evolutionary history, which is determined through similarities in anatomy and, if possible,

3481-456: The vertebra may cause a pathologic condition: persistent notochordal canal . If the notochord and the nasopharynx do not separate properly during embryonic development, a depression (Tornwaldt bursa) or Tornwaldt cyst may form. The cells are the likely precursors to a rare cancer called chordoma . Research into the notochord has played a key role in understanding the development of the central nervous system . By transplanting and expressing

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