83-409: 2CUH , 2CUI , 2CUM 7148 81877 ENSG00000231608 ENSG00000206258 ENSG00000168477 ENSMUSG00000033327 P22105 n/a NM_032470 NM_019105 NM_001365276 NM_031176 NP_061978 NP_115859 NP_001352205 n/a Tenascin X (TN-X), also known as flexillin or hexabrachion-like protein , is a 450kDa glycoprotein , a member of the tenascin family, that
166-607: A 2.7 kb cDNA clone that showed similarities to tenascin, leading to the identification of the XB gene. This gene was initially called "Gene X" because its nature and function were unknown at the time. Further research revealed that this gene encodes the Tenascin-X protein, which belongs to the family of tenascins. This article incorporates text from the United States National Library of Medicine , which
249-416: A high viscosity , for example, in egg white and blood plasma . Variable surface glycoproteins allow the sleeping sickness Trypanosoma parasite to escape the immune response of the host. The viral spike of the human immunodeficiency virus is heavily glycosylated. Approximately half the mass of the spike is glycosylation and the glycans act to limit antibody recognition as the glycans are assembled by
332-417: A lower lobe, by the oblique fissure, which extends from the costal to the mediastinal surface of the lung both above and below the hilum . The left lung, unlike the right, does not have a middle lobe, though it does have a homologous feature, a projection of the upper lobe termed the lingula . Its name means "little tongue". The lingula on the left lung serves as an anatomic parallel to the middle lobe on
415-518: A modular structure composed, from the N- to the C-terminal part by a Tenascin assembly domain (TAD), a series of 18.5 repeats of epidermal growth factor (EGF)-like motif , a high number of Fibronectin type III (FNIII) module, and a fibrinogen (FBG)-like globular domain. The TNXB gene localizes to the major histocompatibility complex ( MHC class III ) region on chromosome 6. The structure of this gene
498-501: A monomodular structure of the RCCX cluster, all of the genes are functional, i.e. protein-coding , but if there are two or more modules within the cluster, there is only one copy of each functional gene rest being non-coding pseudogenes with the exception of the C4 gene which always has active copies. For example, in a bimodular configuration most common among Europeans, the cluster consists of
581-502: A rare and hereditary connective tissue disorder in mice and human. This pathology is characterized by skin hyperlaxity, joint hypermobility and global tissue weakness as a consequence of elastin fragmentation and reduced collagen density, especially in skin. Tenascin-X (TNX) protein was discovered during studies of human steroidogenesis and its disorders, particularly in patients with 21-hydroxylase deficiency, rather than during studies of connective tissue disorders. Researchers sequenced
664-485: A right lung with only two lobes, or a left lung with three lobes. A variation in the airway branching structure has been found specifically in the central airway branching. This variation is associated with the development of COPD in adulthood. The development of the human lungs arise from the laryngotracheal groove and develop to maturity over several weeks in the foetus and for several years following birth. The larynx , trachea , bronchi and lungs that make up
747-552: A single GlcNAc residue that is considered reciprocal to phosphorylation and the functions of these are likely to be an additional regulatory mechanism that controls phosphorylation-based signalling. In contrast, classical secretory glycosylation can be structurally essential. For example, inhibition of asparagine-linked, i.e. N-linked, glycosylation can prevent proper glycoprotein folding and full inhibition can be toxic to an individual cell. In contrast, perturbation of glycan processing (enzymatic removal/addition of carbohydrate residues to
830-519: A unique blood supply, receiving deoxygenated blood sent from the heart for the purposes of receiving oxygen (the pulmonary circulation ) and a separate supply of oxygenated blood (the bronchial circulation ). The tissue of the lungs can be affected by a number of respiratory diseases , including pneumonia and lung cancer . Chronic diseases such as chronic obstructive pulmonary disease and emphysema can be related to smoking or exposure to harmful substances. Diseases such as bronchitis can also affect
913-725: Is a compound containing carbohydrate (or glycan) covalently linked to protein. The carbohydrate may be in the form of a monosaccharide, disaccharide(s). oligosaccharide(s), polysaccharide(s), or their derivatives (e.g. sulfo- or phospho-substituted). One, a few, or many carbohydrate units may be present. Proteoglycans are a subclass of glycoproteins in which the carbohydrate units are polysaccharides that contain amino sugars. Such polysaccharides are also known as glycosaminoglycans. A variety of methods used in detection, purification, and structural analysis of glycoproteins are The glycosylation of proteins has an array of different applications from influencing cell to cell communication to changing
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#1732791383053996-414: Is also responsible for the elastic recoil needed. Elastin is more concentrated in areas of high stress such as the openings of the alveoli, and alveolar junctions. The connective tissue links all the alveoli to form the lung parenchyma which has a sponge-like appearance. The alveoli have interconnecting air passages in their walls known as the pores of Kohn . All of the lower respiratory tract including
1079-428: Is complete, the amino acid sequence can be expanded upon using solid-phase peptide synthesis. Lung The lungs are the primary organs of the respiratory system in many animals, including humans. In mammals and most other tetrapods , two lungs are located near the backbone on either side of the heart . Their function in the respiratory system is to extract oxygen from the atmosphere and transfer it into
1162-422: Is divided into three lobes by a horizontal fissure , and an oblique fissure . The left lung is divided into two lobes by an oblique fissure which is closely aligned with the oblique fissure in the right lung. In the right lung the upper horizontal fissure, separates the upper (superior) lobe from the middle lobe. The lower, oblique fissure separates the lower lobe from the middle and upper lobes. Variations in
1245-400: Is enclosed within a pleural sac of two pleurae which allows the inner and outer walls to slide over each other whilst breathing takes place, without much friction. The inner visceral pleura divides each lung as fissures into sections called lobes. The right lung has three lobes and the left has two. The lobes are further divided into bronchopulmonary segments and lobules. The lungs have
1328-643: Is expressed in connective tissues. In humans it is encoded by the TNXB gene . The TN-X protein is expressed in many parts of the human body, including the skin, muscles, kidneys, blood vessels, and digestive tract. Deficiencies in the TN-X protein due to mutations or not enough of it being produced (haploinsufficiency) can lead to a rare condition called classical-like Ehlers-Danlos syndrome (EDS). People with EDS may have loose joints and weak tissues because their bodies don't make enough collagen properly. TN-X possesses
1411-401: Is held in the fluid-filled amniotic sac and so they do not function to breathe. Blood is also diverted from the lungs through the ductus arteriosus . At birth however, air begins to pass through the lungs, and the diversionary duct closes, so that the lungs can begin to respire. The lungs only fully develop in early childhood. In humans the lungs are located in the chest on either side of
1494-507: Is in the public domain . Glycoprotein Glycoproteins are proteins which contain oligosaccharide (sugar) chains covalently attached to amino acid side-chains. The carbohydrate is attached to the protein in a cotranslational or posttranslational modification . This process is known as glycosylation . Secreted extracellular proteins are often glycosylated. In proteins that have segments extending extracellularly,
1577-427: Is likely to be made up of between 30 and 50 primary lobules. The lobule is supplied by a terminal bronchiole that branches into respiratory bronchioles. The respiratory bronchioles supply the alveoli in each acinus and is accompanied by a pulmonary artery branch. Each lobule is enclosed by an interlobular septum. Each acinus is incompletely separated by an intralobular septum. The respiratory bronchiole gives rise to
1660-530: Is likely to have been secondary to its role in host-pathogen interactions. A famous example of this latter effect is the ABO blood group system . Though there are different types of glycoproteins, the most common are N -linked and O -linked glycoproteins. These two types of glycoproteins are distinguished by structural differences that give them their names. Glycoproteins vary greatly in composition, making many different compounds such as antibodies or hormones. Due to
1743-521: Is mainly located within the connective tissue such as peritendineum (external structural component of tendons), epimysium and perimysium (muscle components), renal glomeruli, blood vessels and skin dermis. TN-X has been proposed to have an important structural and architectural function, especially within the skin. In fact, in vitro experiments demonstrate that TN-X physically interacts with fibrillar collagens type I , III and V , as well as FACIT (Fibrillar Associated Collagen with Interruption of
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#17327913830531826-435: Is the part of the lung distal to the respiratory bronchiole. Thus, it includes the alveolar ducts, sacs, and alveoli but not the respiratory bronchioles. The unit described as the secondary pulmonary lobule is the lobule most referred to as the pulmonary lobule or respiratory lobule . This lobule is a discrete unit that is the smallest component of the lung that can be seen without aid. The secondary pulmonary lobule
1909-450: Is through the reaction between a protected glycan and a protected Asparagine. Similarly, an O-linked glycoprotein can be formed through the addition of a glycosyl donor with a protected Serine or Threonine . These two methods are examples of natural linkage. However, there are also methods of unnatural linkages. Some methods include ligation and a reaction between a serine-derived sulfamidate and thiohexoses in water. Once this linkage
1992-522: Is unusual in that it overlaps the CREBL1 and CYP21A2 genes at its 5' and 3' ends, respectively. The TNXB gene has an associated pseudogene, TNXA . Both TNXA and TNXB genes are located within the RCCX cluster, which consists of a series of modules with genes close to each other: serine/threonine kinase 19 ( STK19 ), complement 4 ( C4 ), steroid 21-hydroxylase ( CYP21 ), and tenascin-X ( TNX ). In
2075-425: The carina where the trachea divides into the two main bronchi. The cardiac impression is an indentation formed on the surfaces of the lungs where they rest against the heart. Both lungs have a central recession called the hilum , where the blood vessels and airways pass into the lungs making up the root of the lung . There are also bronchopulmonary lymph nodes on the hilum. The lungs are surrounded by
2158-470: The circulation , and carbon dioxide diffuses from the blood into the lungs to be breathed out . Estimates of the total surface area of lungs vary from 50 to 75 square metres (540 to 810 sq ft); although this is often quoted in textbooks and the media being "the size of a tennis court", it is actually less than half the size of a singles court . The bronchi in the conducting zone are reinforced with hyaline cartilage in order to hold open
2241-438: The esophagus behind the hilum and the pulmonary ligament , and near the lower part of the esophageal groove is a deeper groove for the inferior vena cava before it enters the heart. The weight of the right lung varies between individuals, with a standard reference range in men of 155–720 g (0.342–1.587 lb) and in women of 100–590 g (0.22–1.30 lb). The left lung is divided into two lobes, an upper and
2324-418: The heart in the rib cage . They are conical in shape with a narrow rounded apex at the top, and a broad concave base that rests on the convex surface of the diaphragm . The apex of the lung extends into the root of the neck, reaching shortly above the level of the sternal end of the first rib . The lungs stretch from close to the backbone in the rib cage to the front of the chest and downwards from
2407-676: The immune system . They remove substances which deposit in the alveoli including loose red blood cells that have been forced out from blood vessels. There is a large presence of microorganisms in the lungs known as the lung microbiota that interacts with the airway epithelial cells; an interaction of probable importance in maintaining homeostasis. The microbiota is complex and dynamic in healthy people, and altered in diseases such as asthma and COPD . For example significant changes can take place in COPD following infection with rhinovirus . Fungal genera that are commonly found as mycobiota in
2490-427: The pulmonary pleurae . The pleurae are two serous membranes ; the outer parietal pleura lines the inner wall of the rib cage and the inner visceral pleura directly lines the surface of the lungs. Between the pleurae is a potential space called the pleural cavity containing a thin layer of lubricating pleural fluid . Middle Lower Lingula Lower Each lung is divided into sections called lobes by
2573-897: The Triple helix) including type XII and XIV collagens. It also interacts with Transforming Growth Factor (TGF)-β which is a pro- fibrotic cytokine and Decorin , a small 100 kDa dermatan sulfate proteoglycan that plays a crucial role in collagen fibrillogenesis . In vivo , transmission electron microscopy coupled with immuno-labelling confirms the very close location of TN-X with collagen fibbers in dermis, tendons and kidney glomeruli . In addition to this architectural function, TN-X also demonstrated counter-adhesive properties, at least for human osteosarcoma cells (MG-63), murine embryonic fibroblasts (MRC-5) as well as human endothelial cells (ECV-304). Homozygous mutations, heterozygous compound (bi-allelic) mutations or haploinsufficiency in TN-X cause classical-like Ehlers-Danlos syndrome (EDS),
Tenascin X - Misplaced Pages Continue
2656-473: The airways initiate a reflex known as the Hering–Breuer reflex that prevents the lungs from over-inflation, during forceful inspiration. The lungs have a dual blood supply provided by a bronchial and a pulmonary circulation . The bronchial circulation supplies oxygenated blood to the airways of the lungs, through the bronchial arteries that leave the aorta . There are usually three arteries, two to
2739-399: The airways. The bronchioles have no cartilage and are surrounded instead by smooth muscle . Air is warmed to 37 °C (99 °F), humidified and cleansed by the conducting zone. Particles from the air being removed by the cilia on the respiratory epithelium lining the passageways, in a process called mucociliary clearance . Pulmonary stretch receptors in the smooth muscle of
2822-464: The alveolar ducts that lead to the alveolar sacs, which contain two or more alveoli. The walls of the alveoli are extremely thin allowing a fast rate of diffusion . The alveoli have interconnecting small air passages in their walls known as the pores of Kohn . Alveoli consist of two types of alveolar cell and an alveolar macrophage . The two types of cell are known as type I and type II cells (also known as pneumocytes). Types I and II make up
2905-474: The alveolar septa which separate each alveolus. The septa consist of an epithelial lining and associated basement membranes . Type I cells are not able to divide, and consequently rely on differentiation from Type II cells. Type II are larger and they line the alveoli and produce and secrete epithelial lining fluid, and lung surfactant . Type II cells are able to divide and differentiate to Type I cells. The alveolar macrophages have an important role in
2988-462: The alveoli. The four genes mostly associated with branching morphogenesis in the lung are the intercellular signalling protein – sonic hedgehog (SHH), fibroblast growth factors FGF10 and FGFR2b, and bone morphogenetic protein BMP4 . FGF10 is seen to have the most prominent role. FGF10 is a paracrine signalling molecule needed for epithelial branching, and SHH inhibits FGF10. The development of
3071-410: The base of the lung. By standard reference range , the weight of the left lung is 110–675 g (0.243–1.488 lb) in men and 105–515 g (0.231–1.135 lb) in women. The lungs are part of the lower respiratory tract , and accommodate the bronchial airways when they branch from the trachea. The bronchial airways terminate in alveoli which make up the functional tissue ( parenchyma ) of
3154-436: The bloodstream, and to release carbon dioxide from the bloodstream into the atmosphere, in a process of gas exchange . Respiration is driven by different muscular systems in different species. Mammals, reptiles and birds use their musculoskeletal systems to support and foster breathing. In early tetrapods, air was driven into the lungs by the pharyngeal muscles via buccal pumping , a mechanism still seen in amphibians. In humans,
3237-542: The body is mucins , which are secreted in the mucus of the respiratory and digestive tracts. The sugars when attached to mucins give them considerable water-holding capacity and also make them resistant to proteolysis by digestive enzymes. Glycoproteins are important for white blood cell recognition. Examples of glycoproteins in the immune system are: H antigen of the ABO blood compatibility antigens. Other examples of glycoproteins include: Soluble glycoproteins often show
3320-416: The branch. In the development of the lungs (as in some other organs) the epithelium forms branching tubes. The lung has a left-right symmetry and each bud known as a bronchial bud grows out as a tubular epithelium that becomes a bronchus. Each bronchus branches into bronchioles. The branching is a result of the tip of each tube bifurcating. The branching process forms the bronchi, bronchioles, and ultimately
3403-402: The bronchus and bronchioles, and increases the secretions from glands. The lungs also have a sympathetic tone from norepinephrine acting on the beta 2 adrenoceptors in the respiratory tract, which causes bronchodilation . The action of breathing takes place because of nerve signals sent by the respiratory center in the brainstem , along the phrenic nerve from the cervical plexus to
Tenascin X - Misplaced Pages Continue
3486-483: The cell, causing a decrease in drug effectiveness. Therefore, being able to inhibit this behavior would decrease P-glycoprotein interference in drug delivery, making this an important topic in drug discovery. For example, P-Glycoprotein causes a decrease in anti-cancer drug accumulation within tumor cells, limiting the effectiveness of chemotherapies used to treat cancer. Hormones that are glycoproteins include: Quoting from recommendations for IUPAC: A glycoprotein
3569-533: The composition of which is tightly regulated and determines how well mucociliary clearance works. Pulmonary neuroendocrine cells are found throughout the respiratory epithelium including the alveolar epithelium, though they only account for around 0.5 percent of the total epithelial population. PNECs are innervated airway epithelial cells that are particularly focused at airway junction points. These cells can produce serotonin, dopamine, and norepinephrine, as well as polypeptide products. Cytoplasmic processes from
3652-423: The diaphragm. The lobes of the lung are subject to anatomical variations . A horizontal interlobar fissure was found to be incomplete in 25% of right lungs, or even absent in 11% of all cases. An accessory fissure was also found in 14% and 22% of left and right lungs, respectively. An oblique fissure was found to be incomplete in 21% to 47% of left lungs. In some cases a fissure is absent, or extra, resulting in
3735-414: The extracellular segments are also often glycosylated. Glycoproteins are also often important integral membrane proteins , where they play a role in cell–cell interactions. It is important to distinguish endoplasmic reticulum-based glycosylation of the secretory system from reversible cytosolic-nuclear glycosylation. Glycoproteins of the cytosol and nucleus can be modified through the reversible addition of
3818-460: The fissures are fairly common being either incompletely formed or present as an extra fissure as in the azygos fissure , or absent. Incomplete fissures are responsible for interlobar collateral ventilation , airflow between lobes which is unwanted in some lung volume reduction procedures. The main or primary bronchi enter the lungs at the hilum and initially branch into secondary bronchi also known as lobar bronchi that supply air to each lobe of
3901-405: The following genes: STK19-C4A-CYP21A1P-TNXA-STK19B-C4B-CYP21A2-TNXB. As such, TNXA is a duplicated copy of TNXB, but is incomplete, therefore, TNXA a pseudogene that is transcribed but does not encode a protein. The presence of the pseudogeneis a consequence of MHC class III locus duplication during evolution. Strong 3' homology between TNXB and TNXA can provoke genetic recombination between
3984-420: The glycan), which occurs in both the endoplasmic reticulum and Golgi apparatus , is dispensable for isolated cells (as evidenced by survival with glycosides inhibitors) but can lead to human disease (congenital disorders of glycosylation) and can be lethal in animal models. It is therefore likely that the fine processing of glycans is important for endogenous functionality, such as cell trafficking, but that this
4067-406: The hilum, is a well-marked curved groove for the aortic arch , and a groove below it for the descending aorta . The left subclavian artery , a branch off the aortic arch, sits in a groove from the arch to near the apex of the lung. A shallower groove in front of the artery and near the edge of the lung, lodges the left brachiocephalic vein . The esophagus may sit in a wider shallow impression at
4150-535: The host cell and so are largely 'self'. Over time, some patients can evolve antibodies to recognise the HIV glycans and almost all so-called 'broadly neutralising antibodies (bnAbs) recognise some glycans. This is possible mainly because the unusually high density of glycans hinders normal glycan maturation and they are therefore trapped in the premature, high-mannose, state. This provides a window for immune recognition. In addition, as these glycans are much less variable than
4233-413: The infoldings of the visceral pleura as fissures. Lobes are divided into segments, and segments have further divisions as lobules. There are three lobes in the right lung and two lobes in the left lung. The fissures are formed in early prenatal development by invaginations of the visceral pleura that divide the lobar bronchi, and section the lungs into lobes that helps in their expansion. The right lung
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#17327913830534316-458: The left lung and one to the right, and they branch alongside the bronchi and bronchioles. The pulmonary circulation carries deoxygenated blood from the heart to the lungs and returns the oxygenated blood to the heart to supply the rest of the body. The blood volume of the lungs is about 450 millilitres on average, about 9% of the total blood volume of the entire circulatory system. This quantity can easily fluctuate from between one-half and twice
4399-420: The lower part of the trachea to the diaphragm. The left lung shares space with the heart, and has an indentation in its border called the cardiac notch of the left lung to accommodate this. The front and outer sides of the lungs face the ribs, which make light indentations on their surfaces. The medial surfaces of the lungs face towards the centre of the chest, and lie against the heart, great vessels , and
4482-495: The lung, and veins, arteries, nerves, and lymphatic vessels . The trachea and bronchi have plexuses of lymph capillaries in their mucosa and submucosa. The smaller bronchi have a single layer of lymph capillaries, and they are absent in the alveoli. The lungs are supplied with the largest lymphatic drainage system of any other organ in the body. Each lung is surrounded by a serous membrane of visceral pleura , which has an underlying layer of loose connective tissue attached to
4565-415: The lung. The lobar bronchi branch into tertiary bronchi also known as segmental bronchi and these supply air to the further divisions of the lobes known as bronchopulmonary segments . Each bronchopulmonary segment has its own (segmental) bronchus and arterial supply . Segments for the left and right lung are shown in the table. The segmental anatomy is useful clinically for localising disease processes in
4648-419: The lungs. A segment is a discrete unit that can be surgically removed without seriously affecting surrounding tissue. The right lung has both more lobes and segments than the left. It is divided into three lobes, an upper, middle, and a lower lobe by two fissures, one oblique and one horizontal. The upper, horizontal fissure, separates the upper from the middle lobe. It begins in the lower oblique fissure near
4731-409: The microbiota include Candida , Malassezia , Saccharomyces , and Aspergillus . The lower respiratory tract is part of the respiratory system , and consists of the trachea and the structures below this including the lungs. The trachea receives air from the pharynx and travels down to a place where it splits (the carina ) into a right and left primary bronchus . These supply air to
4814-469: The most common cell line used for recombinant glycoprotein production is the Chinese hamster ovary line. However, as technologies develop, the most promising cell lines for recombinant glycoprotein production are human cell lines. The formation of the link between the glycan and the protein is key element of the synthesis of glycoproteins. The most common method of glycosylation of N-linked glycoproteins
4897-706: The most common. Monosaccharides commonly found in eukaryotic glycoproteins include: The sugar group(s) can assist in protein folding , improve proteins' stability and are involved in cell signalling. The critical structural element of all glycoproteins is having oligosaccharides bonded covalently to a protein. There are 10 common monosaccharides in mammalian glycans including: glucose (Glc), fucose (Fuc), xylose (Xyl), mannose (Man), galactose (Gal), N- acetylglucosamine (GlcNAc), glucuronic acid (GlcA), iduronic acid (IdoA), N-acetylgalactosamine (GalNAc), sialic acid , and 5- N-acetylneuraminic acid (Neu5Ac). These glycans link themselves to specific areas of
4980-416: The normal volume. Also, in the event of blood loss through hemorrhage, blood from the lungs can partially compensate by automatically transferring to the systemic circulation. The lungs are supplied by nerves of the autonomic nervous system . Input from the parasympathetic nervous system occurs via the vagus nerve . When stimulated by acetylcholine , this causes constriction of the smooth muscle lining
5063-406: The posterior border of the lung, and, running horizontally forward, cuts the anterior border on a level with the sternal end of the fourth costal cartilage ; on the mediastinal surface it may be traced back to the hilum . The lower, oblique fissure, separates the lower from the middle and upper lobes and is closely aligned with the oblique fissure in the left lung. The mediastinal surface of
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#17327913830535146-425: The primary muscle that drives breathing is the diaphragm . The lungs also provide airflow that makes vocalisation including speech possible. Humans have two lungs, a right lung and a left lung. They are situated within the thoracic cavity of the chest . The right lung is bigger than the left, the left lung shares space in the chest with the heart. The lungs together weigh approximately 1.3 kilograms (2.9 lb), and
5229-471: The production of the protein. Glycosylation is a process that roughly half of all human proteins undergo and heavily influences the properties and functions of the protein. Within the cell, glycosylation occurs in the endoplasmic reticulum . There are several techniques for the assembly of glycoproteins. One technique utilizes recombination . The first consideration for this method is the choice of host, as there are many different factors that can influence
5312-488: The protein amino acid chain. The two most common linkages in glycoproteins are N -linked and O -linked glycoproteins. An N -linked glycoprotein has glycan bonds to the nitrogen containing an asparagine amino acid within the protein sequence. An O -linked glycoprotein has the sugar is bonded to an oxygen atom of a serine or threonine amino acid in the protein. Glycoprotein size and composition can vary largely, with carbohydrate composition ranges from 1% to 70% of
5395-467: The pulmonary neuroendocrine cells extend into the airway lumen where they may sense the composition of inspired gas. In the bronchi there are incomplete tracheal rings of cartilage and smaller plates of cartilage that keep them open. Bronchioles are too narrow to support cartilage and their walls are of smooth muscle , and this is largely absent in the narrower respiratory bronchioles which are mainly just of epithelium. The absence of cartilage in
5478-487: The purposes of this field of study is to determine which proteins are glycosylated and where in the amino acid sequence the glycosylation occurs. Historically, mass spectrometry has been used to identify the structure of glycoproteins and characterize the carbohydrate chains attached. The unique interaction between the oligosaccharide chains have different applications. First, it aids in quality control by identifying misfolded proteins. The oligosaccharide chains also change
5561-404: The respiratory tract, begin to form during the fourth week of embryogenesis from the lung bud which appears ventrally to the caudal portion of the foregut . The respiratory tract has a branching structure, and is also known as the respiratory tree. In the embryo this structure is developed in the process of branching morphogenesis , and is generated by the repeated splitting of the tip of
5644-456: The respiratory tract. Medical terms related to the lung often begin with pulmo-, from the Latin pulmonarius (of the lungs) as in pulmonology, or with pneumo- (from Greek πνεύμων "lung") as in pneumonia. In embryonic development , the lungs begin to develop as an outpouching of the foregut , a tube which goes on to form the upper part of the digestive system . When the lungs are formed the fetus
5727-429: The right and left lungs, splitting progressively into the secondary and tertiary bronchi for the lobes of the lungs, and into smaller and smaller bronchioles until they become the respiratory bronchioles . These in turn supply air through alveolar ducts into the alveoli , where the exchange of gases take place. Oxygen breathed in , diffuses through the walls of the alveoli into the enveloping capillaries and into
5810-425: The right is heavier. The lungs are part of the lower respiratory tract that begins at the trachea and branches into the bronchi and bronchioles , and which receive air breathed in via the conducting zone . These divide until air reaches microscopic alveoli , where gas exchange takes place. Together, the lungs contain approximately 2,400 kilometres (1,500 mi) of airways and 300 to 500 million alveoli. Each lung
5893-403: The right lung is indented by a number of nearby structures. The heart sits in an impression called the cardiac impression. Above the hilum of the lung is an arched groove for the azygos vein , and above this is a wide groove for the superior vena cava and right brachiocephalic vein ; behind this, and close to the top of the lung is a groove for the brachiocephalic artery . There is a groove for
5976-425: The right lung, with both areas being predisposed to similar infections and anatomic complications. There are two bronchopulmonary segments of the lingula: superior and inferior. The mediastinal surface of the left lung has a large cardiac impression where the heart sits. This is deeper and larger than that on the right lung, at which level the heart projects to the left. On the same surface, immediately above
6059-405: The solubility and polarity of the proteins that they are bonded to. For example, if the oligosaccharide chains are negatively charged, with enough density around the protein, they can repulse proteolytic enzymes away from the bonded protein. The diversity in interactions lends itself to different types of glycoproteins with different structures and functions. One example of glycoproteins found in
6142-441: The substance of the lung. The connective tissue of the lungs is made up of elastic and collagen fibres that are interspersed between the capillaries and the alveolar walls. Elastin is the key protein of the extracellular matrix and is the main component of the elastic fibres . Elastin gives the necessary elasticity and resilience required for the persistent stretching involved in breathing, known as lung compliance . It
6225-493: The success of glycoprotein recombination such as cost, the host environment, the efficacy of the process, and other considerations. Some examples of host cells include E. coli, yeast, plant cells, insect cells, and mammalian cells. Of these options, mammalian cells are the most common because their use does not face the same challenges that other host cells do such as different glycan structures, shorter half life, and potential unwanted immune responses in humans. Of mammalian cells,
6308-467: The terminal bronchioles gives them an alternative name of membranous bronchioles . The conducting zone of the respiratory tract ends at the terminal bronchioles when they branch into the respiratory bronchioles. This marks the beginning of the terminal respiratory unit called the acinus which includes the respiratory bronchioles, the alveolar ducts, alveolar sacs , and alveoli. An acinus measures up to 10 mm in diameter. A primary pulmonary lobule
6391-403: The thermal stability and the folding of proteins. Due to the unique abilities of glycoproteins, they can be used in many therapies. By understanding glycoproteins and their synthesis, they can be made to treat cancer, Crohn's Disease , high cholesterol, and more. The process of glycosylation (binding a carbohydrate to a protein) is a post-translational modification , meaning it happens after
6474-543: The total mass of the glycoprotein. Within the cell, they appear in the blood, the extracellular matrix , or on the outer surface of the plasma membrane, and make up a large portion of the proteins secreted by eukaryotic cells. They are very broad in their applications and can function as a variety of chemicals from antibodies to hormones. Glycomics is the study of the carbohydrate components of cells. Though not exclusive to glycoproteins, it can reveal more information about different glycoproteins and their structure. One of
6557-451: The trachea, bronchi, and bronchioles is lined with respiratory epithelium . This is a ciliated epithelium interspersed with goblet cells which produce mucin the main component of mucus , ciliated cells, basal cells , and in the terminal bronchioles – club cells with actions similar to basal cells, and macrophages . The epithelial cells, and the submucosal glands throughout the respiratory tract secrete airway surface liquid (ASL),
6640-440: The two loci, thus leading to the apparition of TNXA/TNXB chimera . TN-X is constitutively expressed in adult tissues such as skin , ligaments , tendons , lungs , kidneys , optic nerves , mammary and adrenal glands , blood vessels , testis , and ovaries . It is also found in different compartments of the digestive tract , including pancreas , stomach , jejunum , ileum , and colon. In this wide variety of organs, TN-X
6723-402: The underlying protein, they have emerged as promising targets for vaccine design. P-glycoproteins are critical for antitumor research due to its ability block the effects of antitumor drugs. P-glycoprotein, or multidrug transporter (MDR1), is a type of ABC transporter that transports compounds out of cells. This transportation of compounds out of cells includes drugs made to be delivered to
6806-464: The walls and alveolar septa . Type I cells provide 95% of the surface area of each alveoli and are flat (" squamous "), and Type II cells generally cluster in the corners of the alveoli and have a cuboidal shape. Despite this, cells occur in a roughly equal ratio of 1:1 or 6:4. Type I are squamous epithelial cells that make up the alveolar wall structure. They have extremely thin walls that enable an easy gas exchange. These type I cells also make up
6889-400: The wide array of functions within the body, interest in glycoprotein synthesis for medical use has increased. There are now several methods to synthesize glycoproteins, including recombination and glycosylation of proteins. Glycosylation is also known to occur on nucleo cytoplasmic proteins in the form of O -GlcNAc . There are several types of glycosylation, although the first two are
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