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117-407: Ribonucleic acid ( RNA ) is a polymeric molecule that is essential for most biological functions, either by performing the function itself ( non-coding RNA ) or by forming a template for the production of proteins ( messenger RNA ). RNA and deoxyribonucleic acid (DNA) are nucleic acids . The nucleic acids constitute one of the four major macromolecules essential for all known forms of life . RNA

234-459: A catalyst . Laboratory synthesis of biopolymers, especially of proteins , is an area of intensive research. There are three main classes of biopolymers: polysaccharides , polypeptides , and polynucleotides . In living cells, they may be synthesized by enzyme-mediated processes, such as the formation of DNA catalyzed by DNA polymerase . The synthesis of proteins involves multiple enzyme-mediated processes to transcribe genetic information from

351-441: A lower critical solution temperature phase transition (LCST), at which phase separation occurs with heating. In dilute solutions, the properties of the polymer are characterized by the interaction between the solvent and the polymer. In a good solvent, the polymer appears swollen and occupies a large volume. In this scenario, intermolecular forces between the solvent and monomer subunits dominate over intramolecular interactions. In

468-487: A 1993 Nobel to Philip Sharp and Richard Roberts . Catalytic RNA molecules ( ribozymes ) were discovered in the early 1980s, leading to a 1989 Nobel award to Thomas Cech and Sidney Altman . In 1990, it was found in Petunia that introduced genes can silence similar genes of the plant's own, now known to be a result of RNA interference . At about the same time, 22 nt long RNAs, now called microRNAs , were found to have

585-502: A bad solvent or poor solvent, intramolecular forces dominate and the chain contracts. In the theta solvent , or the state of the polymer solution where the value of the second virial coefficient becomes 0, the intermolecular polymer-solvent repulsion balances exactly the intramolecular monomer-monomer attraction. Under the theta condition (also called the Flory condition), the polymer behaves like an ideal random coil . The transition between

702-424: A certain amount of time, the message degrades into its component nucleotides with the assistance of ribonucleases . Transfer RNA (tRNA) is a small RNA chain of about 80 nucleotides that transfers a specific amino acid to a growing polypeptide chain at the ribosomal site of protein synthesis during translation. It has sites for amino acid attachment and an anticodon region for codon recognition that binds to

819-408: A degree of crystallinity approaching zero or one will tend to be transparent, while polymers with intermediate degrees of crystallinity will tend to be opaque due to light scattering by crystalline or glassy regions. For many polymers, crystallinity may also be associated with decreased transparency. The space occupied by a polymer molecule is generally expressed in terms of radius of gyration , which

936-587: A deviation from a simple linear chain. A branched polymer molecule is composed of a main chain with one or more substituent side chains or branches. Types of branched polymers include star polymers , comb polymers , polymer brushes , dendronized polymers , ladder polymers , and dendrimers . There exist also two-dimensional polymers (2DP) which are composed of topologically planar repeat units. A polymer's architecture affects many of its physical properties including solution viscosity, melt viscosity, solubility in various solvents, glass-transition temperature and

1053-464: A flexible quality. Plasticizers are also put in some types of cling film to make the polymer more flexible. The attractive forces between polymer chains play a large part in determining the polymer's properties. Because polymer chains are so long, they have many such interchain interactions per molecule, amplifying the effect of these interactions on the polymer properties in comparison to attractions between conventional molecules. Different side groups on

1170-479: A given application, the properties of a polymer can be tuned or enhanced by combination with other materials, as in composites . Their application allows to save energy (lighter cars and planes, thermally insulated buildings), protect food and drinking water (packaging), save land and lower use of fertilizers (synthetic fibres), preserve other materials (coatings), protect and save lives (hygiene, medical applications). A representative, non-exhaustive list of applications

1287-402: A high surface quality and are also highly transparent so that the laser properties are dominated by the laser dye used to dope the polymer matrix. These type of lasers, that also belong to the class of organic lasers , are known to yield very narrow linewidths which is useful for spectroscopy and analytical applications. An important optical parameter in the polymer used in laser applications

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1404-683: A negative charge each, making RNA a charged molecule (polyanion). The bases form hydrogen bonds between cytosine and guanine, between adenine and uracil and between guanine and uracil. However, other interactions are possible, such as a group of adenine bases binding to each other in a bulge, or the GNRA tetraloop that has a guanine–adenine base-pair. The chemical structure of RNA is very similar to that of DNA , but differs in three primary ways: Like DNA, most biologically active RNAs, including mRNA , tRNA , rRNA , snRNAs , and other non-coding RNAs , contain self-complementary sequences that allow parts of

1521-437: A new host cell. Viroids are another group of pathogens, but they consist only of RNA, do not encode any protein and are replicated by a host plant cell's polymerase. Reverse transcribing viruses replicate their genomes by reverse transcribing DNA copies from their RNA; these DNA copies are then transcribed to new RNA. Retrotransposons also spread by copying DNA and RNA from one another, and telomerase contains an RNA that

1638-645: A nucleoprotein called a ribosome. The ribosome binds mRNA and carries out protein synthesis. Several ribosomes may be attached to a single mRNA at any time. Nearly all the RNA found in a typical eukaryotic cell is rRNA. Transfer-messenger RNA (tmRNA) is found in many bacteria and plastids . It tags proteins encoded by mRNAs that lack stop codons for degradation and prevents the ribosome from stalling. The earliest known regulators of gene expression were proteins known as repressors and activators – regulators with specific short binding sites within enhancer regions near

1755-550: A nucleus, also contain nucleic acids. The role of RNA in protein synthesis was suspected already in 1939. Severo Ochoa won the 1959 Nobel Prize in Medicine (shared with Arthur Kornberg ) after he discovered an enzyme that can synthesize RNA in the laboratory. However, the enzyme discovered by Ochoa ( polynucleotide phosphorylase ) was later shown to be responsible for RNA degradation, not RNA synthesis. In 1956 Alex Rich and David Davies hybridized two separate strands of RNA to form

1872-544: A number of RNA-dependent RNA polymerases that use RNA as their template for synthesis of a new strand of RNA. For instance, a number of RNA viruses (such as poliovirus) use this type of enzyme to replicate their genetic material. Also, RNA-dependent RNA polymerase is part of the RNA interference pathway in many organisms. Many RNAs are involved in modifying other RNAs. Introns are spliced out of pre-mRNA by spliceosomes , which contain several small nuclear RNAs (snRNA), or

1989-457: A pathogen and determine which molecular parts to extract, inactivate, and use in a vaccine. Small molecules with conventional therapeutic properties can target RNA and DNA structures, thereby treating novel diseases. However, research is scarce on small molecules targeting RNA and approved drugs for human illness. Ribavirin, branaplam, and ataluren are currently available medications that stabilize double-stranded RNA structures and control splicing in

2106-401: A polymer behaves as a continuous macroscopic material. They are classified as bulk properties, or intensive properties according to thermodynamics . The bulk properties of a polymer are those most often of end-use interest. These are the properties that dictate how the polymer actually behaves on a macroscopic scale. The tensile strength of a material quantifies how much elongating stress

2223-421: A polymer is its first and most important attribute. Polymer nomenclature is generally based upon the type of monomer residues comprising the polymer. A polymer which contains only a single type of repeat unit is known as a homopolymer , while a polymer containing two or more types of repeat units is known as a copolymer . A terpolymer is a copolymer which contains three types of repeat units. Polystyrene

2340-433: A polymeric material can be described at different length scales, from the sub-nm length scale up to the macroscopic one. There is in fact a hierarchy of structures, in which each stage provides the foundations for the next one. The starting point for the description of the structure of a polymer is the identity of its constituent monomers. Next, the microstructure essentially describes the arrangement of these monomers within

2457-536: A process called reptation in which each chain molecule is constrained by entanglements with neighboring chains to move within a virtual tube. The theory of reptation can explain polymer molecule dynamics and viscoelasticity . Depending on their chemical structures, polymers may be either semi-crystalline or amorphous. Semi-crystalline polymers can undergo crystallization and melting transitions , whereas amorphous polymers do not. In polymers, crystallization and melting do not suggest solid-liquid phase transitions, as in

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2574-427: A result, they typically have lower melting temperatures than other polymers. When a polymer is dispersed or dissolved in a liquid, such as in commercial products like paints and glues, the chemical properties and molecular interactions influence how the solution flows and can even lead to self-assembly of the polymer into complex structures. When a polymer is applied as a coating, the chemical properties will influence

2691-662: A rock sample at a wavelength of 2.85 micrometers indicated localized water/hydroxyl concentrations as high as 180 parts per million. The Venus Express orbiter collected Venus science data from April 2006 until December 2014. In 2008, Piccioni, et al. reported measurements of night-side airglow emission in the atmosphere of Venus made with the Visible and Infrared Thermal Imaging Spectrometer (VIRTIS) on Venus Express. They attributed emission bands in wavelength ranges of 1.40 - 1.49 micrometers and 2.6 - 3.14 micrometers to vibrational transitions of OH. This

2808-470: A role in the development of C. elegans . Studies on RNA interference earned a Nobel Prize for Andrew Fire and Craig Mello in 2006, and another Nobel for studies on the transcription of RNA to Roger Kornberg in the same year. The discovery of gene regulatory RNAs has led to attempts to develop drugs made of RNA, such as siRNA , to silence genes. Adding to the Nobel prizes for research on RNA, in 2009 it

2925-415: A role in the activation of the innate immune system against viral infections. In the late 1970s, it was shown that there is a single stranded covalently closed, i.e. circular form of RNA expressed throughout the animal and plant kingdom (see circRNA ). circRNAs are thought to arise via a "back-splice" reaction where the spliceosome joins a upstream 3' acceptor to a downstream 5' donor splice site. So far

3042-454: A specific sequence on the messenger RNA chain through hydrogen bonding. Ribosomal RNA (rRNA) is the catalytic component of the ribosomes. The rRNA is the component of the ribosome that hosts translation. Eukaryotic ribosomes contain four different rRNA molecules: 18S, 5.8S, 28S and 5S rRNA. Three of the rRNA molecules are synthesized in the nucleolus , and one is synthesized elsewhere. In the cytoplasm, ribosomal RNA and protein combine to form

3159-429: A specific spatial tertiary structure . The scaffold for this structure is provided by secondary structural elements that are hydrogen bonds within the molecule. This leads to several recognizable "domains" of secondary structure like hairpin loops , bulges, and internal loops . In order to create, i.e., design, RNA for any given secondary structure, two or three bases would not be enough, but four bases are enough. This

3276-456: A statistical distribution of chain lengths, the molecular weight is expressed in terms of weighted averages. The number-average molecular weight ( M n ) and weight-average molecular weight ( M w ) are most commonly reported. The ratio of these two values ( M w / M n ) is the dispersity ( Đ ), which is commonly used to express the width of the molecular weight distribution. The physical properties of polymer strongly depend on

3393-537: A tendency to form amorphous and semicrystalline structures rather than crystals . Polymers are studied in the fields of polymer science (which includes polymer chemistry and polymer physics ), biophysics and materials science and engineering . Historically, products arising from the linkage of repeating units by covalent chemical bonds have been the primary focus of polymer science. An emerging important area now focuses on supramolecular polymers formed by non-covalent links. Polyisoprene of latex rubber

3510-432: A variety of different but structurally related monomer residues; for example, polynucleotides such as DNA are composed of four types of nucleotide subunits. A polymer containing ionizable subunits (e.g., pendant carboxylic groups ) is known as a polyelectrolyte or ionomer , when the fraction of ionizable units is large or small respectively. The microstructure of a polymer (sometimes called configuration) relates to

3627-800: A variety of disorders. Protein-coding mRNAs have emerged as new therapeutic candidates, with RNA replacement being particularly beneficial for brief but torrential protein expression. In vitro transcribed mRNAs (IVT-mRNA) have been used to deliver proteins for bone regeneration, pluripotency, and heart function in animal models. SiRNAs, short RNA molecules, play a crucial role in innate defense against viruses and chromatin structure. They can be artificially introduced to silence specific genes, making them valuable for gene function studies, therapeutic target validation, and drug development. mRNA vaccines have emerged as an important new class of vaccines, using mRNA to manufacture proteins which provoke an immune response. Their first successful large-scale application came in

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3744-498: A wavelength of 6.1 micrometers that are present in water but not in hydroxyl. The abundance of water on the Moon's surface was inferred to be equivalent to the contents of a 12-ounce bottle of water per cubic meter of lunar soil. The Chang'e 5 probe, which landed on the Moon on 1 December 2020, carried a mineralogical spectrometer that could measure infrared reflectance spectra of lunar rock and regolith. The reflectance spectrum of

3861-405: A wide-meshed cross-linking between the "main chains". Close-meshed crosslinking, on the other hand, leads to thermosets . Cross-links and branches are shown as red dots in the figures. Highly branched polymers are amorphous and the molecules in the solid interact randomly. An important microstructural feature of a polymer is its architecture and shape, which relates to the way branch points lead to

3978-401: Is protein synthesis , a universal function in which RNA molecules direct the synthesis of proteins on ribosomes . This process uses transfer RNA ( tRNA ) molecules to deliver amino acids to the ribosome , where ribosomal RNA ( rRNA ) then links amino acids together to form coded proteins. It has become widely accepted in science that early in the history of life on Earth , prior to

4095-423: Is a ribozyme . Each nucleotide in RNA contains a ribose sugar, with carbons numbered 1' through 5'. A base is attached to the 1' position, in general, adenine (A), cytosine (C), guanine (G), or uracil (U). Adenine and guanine are purines , and cytosine and uracil are pyrimidines . A phosphate group is attached to the 3' position of one ribose and the 5' position of the next. The phosphate groups have

4212-814: Is a substance or material that consists of very large molecules, or macromolecules , that are constituted by many repeating subunits derived from one or more species of monomers . Due to their broad spectrum of properties, both synthetic and natural polymers play essential and ubiquitous roles in everyday life. Polymers range from familiar synthetic plastics such as polystyrene to natural biopolymers such as DNA and proteins that are fundamental to biological structure and function. Polymers, both natural and synthetic, are created via polymerization of many small molecules, known as monomers . Their consequently large molecular mass , relative to small molecule compounds , produces unique physical properties including toughness , high elasticity , viscoelasticity , and

4329-479: Is a crucial physical parameter for polymer manufacturing, processing, and use. Below T g , molecular motions are frozen and polymers are brittle and glassy. Above T g , molecular motions are activated and polymers are rubbery and viscous. The glass-transition temperature may be engineered by altering the degree of branching or crosslinking in the polymer or by the addition of plasticizers . Whereas crystallization and melting are first-order phase transitions ,

4446-410: Is a long-chain n -alkane. There are also branched macromolecules with a main chain and side chains, in the case of polyethylene the side chains would be alkyl groups . In particular unbranched macromolecules can be in the solid state semi-crystalline, crystalline chain sections highlighted red in the figure below. While branched and unbranched polymers are usually thermoplastics, many elastomers have

4563-400: Is also commonly present in polymer backbones, such as those of polyethylene glycol , polysaccharides (in glycosidic bonds ), and DNA (in phosphodiester bonds ). Polymerization is the process of combining many small molecules known as monomers into a covalently bonded chain or network. During the polymerization process, some chemical groups may be lost from each monomer. This happens in

4680-512: Is an average distance from the center of mass of the chain to the chain itself. Alternatively, it may be expressed in terms of pervaded volume , which is the volume spanned by the polymer chain and scales with the cube of the radius of gyration. The simplest theoretical models for polymers in the molten, amorphous state are ideal chains . Polymer properties depend of their structure and they are divided into classes according to their physical bases. Many physical and chemical properties describe how

4797-481: Is an example of a natural polymer, and the polystyrene of styrofoam is an example of a synthetic polymer. In biological contexts, essentially all biological macromolecules —i.e., proteins (polyamides), nucleic acids (polynucleotides), and polysaccharides —are purely polymeric, or are composed in large part of polymeric components. The term "polymer" derives from Greek πολύς (polus)  'many, much' and μέρος (meros)  'part'. The term

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4914-569: Is assembled as a chain of nucleotides . Cellular organisms use messenger RNA ( mRNA ) to convey genetic information (using the nitrogenous bases of guanine , uracil , adenine , and cytosine , denoted by the letters G, U, A, and C) that directs synthesis of specific proteins. Many viruses encode their genetic information using an RNA genome . Some RNA molecules play an active role within cells by catalyzing biological reactions, controlling gene expression , or sensing and communicating responses to cellular signals. One of these active processes

5031-493: Is called enhancer RNAs .  It is not clear at present whether they are a unique category of RNAs of various lengths or constitute a distinct subset of lncRNAs.  In any case, they are transcribed from enhancers , which are known regulatory sites in the DNA near genes they regulate.  They up-regulate the transcription of the gene(s) under control of the enhancer from which they are transcribed. At first, regulatory RNA

5148-428: Is composed only of styrene -based repeat units, and is classified as a homopolymer. Polyethylene terephthalate , even though produced from two different monomers ( ethylene glycol and terephthalic acid ), is usually regarded as a homopolymer because only one type of repeat unit is formed. Ethylene-vinyl acetate contains more than one variety of repeat unit and is a copolymer. Some biological polymers are composed of

5265-409: Is defined, for small strains , as the ratio of rate of change of stress to strain. Like tensile strength, this is highly relevant in polymer applications involving the physical properties of polymers, such as rubber bands. The modulus is strongly dependent on temperature. Viscoelasticity describes a complex time-dependent elastic response, which will exhibit hysteresis in the stress-strain curve when

5382-504: Is given below. Hydroxyl According to IUPAC definitions, the term hydroxyl refers to the hydroxyl radical ( ·OH ) only, while the functional group −OH is called a hydroxy group . Water, alcohols, carboxylic acids , and many other hydroxy-containing compounds can be readily deprotonated due to a large difference between the electronegativity of oxygen (3.5) and that of hydrogen (2.1). Hydroxy-containing compounds engage in intermolecular hydrogen bonding increasing

5499-481: Is illuminated by diffuse light, called airglow , that is produced by radiative transitions of atoms and molecules. Among the most intense such features observed in the Earth's night sky is a group of infrared transitions at wavelengths between 700 nanometers and 900 nanometers. In 1950, Aden Meinel showed that these were transitions of the hydroxyl molecule, OH. In 2009, India's Chandrayaan-1 satellite and

5616-417: Is likely why nature has "chosen" a four base alphabet: fewer than four would not allow the creation of all structures, while more than four bases are not necessary to do so. Since RNA is charged, metal ions such as Mg are needed to stabilise many secondary and tertiary structures . The naturally occurring enantiomer of RNA is D -RNA composed of D -ribonucleotides. All chirality centers are located in

5733-413: Is processed to mature mRNA. This removes its introns —non-coding sections of the pre-mRNA. The mRNA is then exported from the nucleus to the cytoplasm , where it is bound to ribosomes and translated into its corresponding protein form with the help of tRNA . In prokaryotic cells, which do not have nucleus and cytoplasm compartments, mRNA can bind to ribosomes while it is being transcribed from DNA. After

5850-435: Is the change in refractive index with temperature also known as dn/dT. For the polymers mentioned here the (dn/dT) ~ −1.4 × 10 in units of K in the 297 ≤ T ≤ 337 K range. Most conventional polymers such as polyethylene are electrical insulators , but the development of polymers containing π-conjugated bonds has led to a wealth of polymer-based semiconductors , such as polythiophenes . This has led to many applications in

5967-563: Is the main constituent of wood and paper. Hemoglycin (previously termed hemolithin ) is a space polymer that is the first polymer of amino acids found in meteorites . The list of synthetic polymers , roughly in order of worldwide demand, includes polyethylene , polypropylene , polystyrene , polyvinyl chloride , synthetic rubber , phenol formaldehyde resin (or Bakelite ), neoprene , nylon , polyacrylonitrile , PVB , silicone , and many more. More than 330 million tons of these polymers are made every year (2015). Most commonly,

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6084-545: Is used as template for building the ends of eukaryotic chromosomes . Double-stranded RNA (dsRNA) is RNA with two complementary strands, similar to the DNA found in all cells, but with the replacement of thymine by uracil and the adding of one oxygen atom. dsRNA forms the genetic material of some viruses ( double-stranded RNA viruses ). Double-stranded RNA, such as viral RNA or siRNA , can trigger RNA interference in eukaryotes , as well as interferon response in vertebrates . In eukaryotes, double-stranded RNA (dsRNA) plays

6201-545: The D -ribose. By the use of L -ribose or rather L -ribonucleotides, L -RNA can be synthesized. L -RNA is much more stable against degradation by RNase . Like other structured biopolymers such as proteins, one can define topology of a folded RNA molecule. This is often done based on arrangement of intra-chain contacts within a folded RNA, termed as circuit topology . RNA is transcribed with only four bases (adenine, cytosine, guanine and uracil), but these bases and attached sugars can be modified in numerous ways as

6318-622: The LCROSS probe revealed an ultraviolet emission spectrum consistent with hydroxyl presence. On 26 October 2020, NASA reported definitive evidence of water on the sunlit surface of the Moon, in the vicinity of the crater Clavius (crater) , obtained by the Stratospheric Observatory for Infrared Astronomy (SOFIA) . The SOFIA Faint Object infrared Camera for the SOFIA Telescope (FORCAST) detected emission bands at

6435-672: The National Aeronautics and Space Administration (NASA) Cassini spacecraft and Deep Impact probe each detected evidence of water by evidence of hydroxyl fragments on the Moon . As reported by Richard Kerr, "A spectrometer [the Moon Mineralogy Mapper, also known as "M3"] detected an infrared absorption at a wavelength of 3.0 micrometers that only water or hydroxyl—a hydrogen and an oxygen bound together—could have created." NASA also reported in 2009 that

6552-496: The RNA World theory. There are indications that the enterobacterial sRNAs are involved in various cellular processes and seem to have significant role in stress responses such as membrane stress, starvation stress, phosphosugar stress and DNA damage. Also, it has been suggested that sRNAs have been evolved to have important role in stress responses because of their kinetic properties that allow for rapid response and stabilisation of

6669-473: The aldehyde end of one sugar . The creation of a peptide bond to link two amino acids to make a protein removes the −OH from the carboxy group of one amino acid. Hydroxyl radicals are highly reactive and undergo chemical reactions that make them short-lived. When biological systems are exposed to hydroxyl radicals, they can cause damage to cells, including those in humans, where they can react with DNA , lipids , and proteins . The Earth's night sky

6786-447: The amino acid sequence in the protein that is produced. However, many RNAs do not code for protein (about 97% of the transcriptional output is non-protein-coding in eukaryotes). These so-called non-coding RNAs ("ncRNA") can be encoded by their own genes (RNA genes), but can also derive from mRNA introns . The most prominent examples of non-coding RNAs are transfer RNA (tRNA) and ribosomal RNA (rRNA), both of which are involved in

6903-580: The galactic center of the Milky Way Galaxy . RNA, initially deemed unsuitable for therapeutics due to its short half-life, has been made useful through advances in stabilization. Therapeutic applications arise as RNA folds into complex conformations and binds proteins, nucleic acids, and small molecules to form catalytic centers. RNA-based vaccines are thought to be easier to produce than traditional vaccines derived from killed or altered pathogens, because it can take months or years to grow and study

7020-410: The genetic code . There are more than 100 other naturally occurring modified nucleosides. The greatest structural diversity of modifications can be found in tRNA , while pseudouridine and nucleosides with 2'-O-methylribose often present in rRNA are the most common. The specific roles of many of these modifications in RNA are not fully understood. However, it is notable that, in ribosomal RNA, many of

7137-473: The 2006 Nobel Prize in Physiology or Medicine for discovering microRNAs (miRNAs), specific short RNA molecules that can base-pair with mRNAs. Post-transcriptional expression levels of many genes can be controlled by RNA interference , in which miRNAs , specific short RNA molecules, pair with mRNA regions and target them for degradation. This antisense -based process involves steps that first process

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7254-422: The 3’ to 5’ direction, synthesizing a complementary RNA molecule with elongation occurring in the 5’ to 3’ direction. The DNA sequence also dictates where termination of RNA synthesis will occur. Primary transcript RNAs are often modified by enzymes after transcription. For example, a poly(A) tail and a 5' cap are added to eukaryotic pre-mRNA and introns are removed by the spliceosome . There are also

7371-559: The B-form most commonly observed in DNA. The A-form geometry results in a very deep and narrow major groove and a shallow and wide minor groove. A second consequence of the presence of the 2'-hydroxyl group is that in conformationally flexible regions of an RNA molecule (that is, not involved in formation of a double helix), it can chemically attack the adjacent phosphodiester bond to cleave the backbone. The functional form of single-stranded RNA molecules, just like proteins, frequently requires

7488-496: The DNA to RNA and subsequently translate that information to synthesize the specified protein from amino acids . The protein may be modified further following translation in order to provide appropriate structure and functioning. There are other biopolymers such as rubber , suberin , melanin , and lignin . Naturally occurring polymers such as cotton , starch , and rubber were familiar materials for years before synthetic polymers such as polyethene and perspex appeared on

7605-764: The RNA so that it can base-pair with a region of its target mRNAs. Once the base pairing occurs, other proteins direct the mRNA to be destroyed by nucleases . Next to be linked to regulation were Xist and other long noncoding RNAs associated with X chromosome inactivation .  Their roles, at first mysterious, were shown by Jeannie T. Lee and others to be the silencing of blocks of chromatin via recruitment of Polycomb complex so that messenger RNA could not be transcribed from them. Additional lncRNAs, currently defined as RNAs of more than 200 base pairs that do not appear to have coding potential, have been found associated with regulation of stem cell pluripotency and cell division . The third major group of regulatory RNAs

7722-408: The RNA to fold and pair with itself to form double helices. Analysis of these RNAs has revealed that they are highly structured. Unlike DNA, their structures do not consist of long double helices, but rather collections of short helices packed together into structures akin to proteins. In this fashion, RNAs can achieve chemical catalysis (like enzymes). For instance, determination of the structure of

7839-506: The RNAs mature. Pseudouridine (Ψ), in which the linkage between uracil and ribose is changed from a C–N bond to a C–C bond, and ribothymidine (T) are found in various places (the most notable ones being in the TΨC loop of tRNA ). Another notable modified base is hypoxanthine , a deaminated adenine base whose nucleoside is called inosine (I). Inosine plays a key role in the wobble hypothesis of

7956-441: The adhesion of the coating and how it interacts with external materials, such as superhydrophobic polymer coatings leading to water resistance. Overall the chemical properties of a polymer are important elements for designing new polymeric material products. Polymers such as PMMA and HEMA:MMA are used as matrices in the gain medium of solid-state dye lasers , also known as solid-state dye-doped polymer lasers. These polymers have

8073-434: The backbone in a variety of ways. A copolymer containing a controlled arrangement of monomers is called a sequence-controlled polymer . Alternating, periodic and block copolymers are simple examples of sequence-controlled polymers . Tacticity describes the relative stereochemistry of chiral centers in neighboring structural units within a macromolecule. There are three types of tacticity: isotactic (all substituents on

8190-442: The case of the 5S rRNA of the members of the genus Halococcus ( Archaea ), which have an insertion, thus increasing its size. Messenger RNA (mRNA) carries information about a protein sequence to the ribosomes , the protein synthesis factories in the cell. It is coded so that every three nucleotides (a codon ) corresponds to one amino acid. In eukaryotic cells, once precursor mRNA (pre-mRNA) has been transcribed from DNA, it

8307-421: The case of water or other molecular fluids. Instead, crystallization and melting refer to the phase transitions between two solid states ( i.e. , semi-crystalline and amorphous). Crystallization occurs above the glass-transition temperature ( T g ) and below the melting temperature ( T m ). All polymers (amorphous or semi-crystalline) go through glass transitions . The glass-transition temperature ( T g )

8424-402: The cell nucleus and is usually catalyzed by an enzyme— RNA polymerase —using DNA as a template, a process known as transcription . Initiation of transcription begins with the binding of the enzyme to a promoter sequence in the DNA (usually found "upstream" of a gene). The DNA double helix is unwound by the helicase activity of the enzyme. The enzyme then progresses along the template strand in

8541-412: The chemical compound produced on the largest scale industrially. Hydroxy groups participate in the dehydration reactions that link simple biological molecules into long chains. The joining of a fatty acid to glycerol to form a triacylglycerol removes the −OH from the carboxy end of the fatty acid. The joining of two aldehyde sugars to form a disaccharide removes the −OH from the carboxy group at

8658-476: The continuously linked backbone of a polymer used for the preparation of plastics consists mainly of carbon atoms. A simple example is polyethylene ('polythene' in British English), whose repeat unit or monomer is ethylene . Many other structures do exist; for example, elements such as silicon form familiar materials such as silicones, examples being Silly Putty and waterproof plumbing sealant. Oxygen

8775-536: The degree of crystallinity may be expressed in terms of a weight fraction or volume fraction of crystalline material. Few synthetic polymers are entirely crystalline. The crystallinity of polymers is characterized by their degree of crystallinity, ranging from zero for a completely non-crystalline polymer to one for a theoretical completely crystalline polymer. Polymers with microcrystalline regions are generally tougher (can be bent more without breaking) and more impact-resistant than totally amorphous polymers. Polymers with

8892-400: The driving force for mixing is usually entropy , not interaction energy. In other words, miscible materials usually form a solution not because their interaction with each other is more favorable than their self-interaction, but because of an increase in entropy and hence free energy associated with increasing the amount of volume available to each component. This increase in entropy scales with

9009-440: The earliest forms of life (self-replicating molecules) could have relied on RNA both to carry genetic information and to catalyze biochemical reactions—an RNA world . In May 2022, scientists discovered that RNA can form spontaneously on prebiotic basalt lava glass , presumed to have been abundant on the early Earth . In March 2015, DNA and RNA nucleobases , including uracil , cytosine and thymine , were reportedly formed in

9126-466: The electrostatic attraction between molecules and thus to higher boiling and melting points than found for compounds that lack this functional group . Organic compounds, which are often poorly soluble in water, become water-soluble when they contain two or more hydroxy groups, as illustrated by sugars and amino acid . The hydroxy group is pervasive in chemistry and biochemistry. Many inorganic compounds contain hydroxyl groups, including sulfuric acid ,

9243-414: The evolution of DNA and possibly of protein-based enzymes as well, an " RNA world " existed in which RNA served as both living organisms' storage method for genetic information —a role fulfilled today by DNA, except in the case of RNA viruses —and potentially performed catalytic functions in cells—a function performed today by protein enzymes, with the notable and important exception of the ribosome, which

9360-417: The field of organic electronics . Nowadays, synthetic polymers are used in almost all walks of life. Modern society would look very different without them. The spreading of polymer use is connected to their unique properties: low density, low cost, good thermal/electrical insulation properties, high resistance to corrosion, low-energy demanding polymer manufacture and facile processing into final products. For

9477-454: The first crystal of RNA whose structure could be determined by X-ray crystallography. The sequence of the 77 nucleotides of a yeast tRNA was found by Robert W. Holley in 1965, winning Holley the 1968 Nobel Prize in Medicine (shared with Har Gobind Khorana and Marshall Nirenberg ). In the early 1970s, retroviruses and reverse transcriptase were discovered, showing for the first time that enzymes could copy RNA into DNA (the opposite of

9594-465: The form of COVID-19 vaccines during the COVID-19 pandemic . Polymer A polymer is a substance composed of macromolecules. A macromolecule is a molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. A polymer ( / ˈ p ɒ l ɪ m ər / )

9711-527: The free energy of mixing for polymer solutions and thereby making solvation less favorable, and thereby making the availability of concentrated solutions of polymers far rarer than those of small molecules. Furthermore, the phase behavior of polymer solutions and mixtures is more complex than that of small molecule mixtures. Whereas most small molecule solutions exhibit only an upper critical solution temperature phase transition (UCST), at which phase separation occurs with cooling, polymer mixtures commonly exhibit

9828-422: The function of circRNAs is largely unknown, although for few examples a microRNA sponging activity has been demonstrated. Research on RNA has led to many important biological discoveries and numerous Nobel Prizes . Nucleic acids were discovered in 1868 by Friedrich Miescher , who called the material 'nuclein' since it was found in the nucleus . It was later discovered that prokaryotic cells, which do not have

9945-548: The genes to be regulated.  Later studies have shown that RNAs also regulate genes. There are several kinds of RNA-dependent processes in eukaryotes regulating the expression of genes at various points, such as RNAi repressing genes post-transcriptionally , long non-coding RNAs shutting down blocks of chromatin epigenetically , and enhancer RNAs inducing increased gene expression. Bacteria and archaea have also been shown to use regulatory RNA systems such as bacterial small RNAs and CRISPR . Fire and Mello were awarded

10062-401: The glass transition is not. The glass transition shares features of second-order phase transitions (such as discontinuity in the heat capacity, as shown in the figure), but it is generally not considered a thermodynamic transition between equilibrium states. In general, polymeric mixtures are far less miscible than mixtures of small molecule materials. This effect results from the fact that

10179-415: The individual chains more strongly in position and resist deformations and matrix breakup, both at higher stresses and higher temperatures. Copolymers are classified either as statistical copolymers, alternating copolymers, block copolymers, graft copolymers or gradient copolymers. In the schematic figure below, Ⓐ and Ⓑ symbolize the two repeat units . Monomers within a copolymer may be organized along

10296-459: The introns can be ribozymes that are spliced by themselves. RNA can also be altered by having its nucleotides modified to nucleotides other than A , C , G and U . In eukaryotes, modifications of RNA nucleotides are in general directed by small nucleolar RNAs (snoRNA; 60–300 nt), found in the nucleolus and cajal bodies . snoRNAs associate with enzymes and guide them to a spot on an RNA by basepairing to that RNA. These enzymes then perform

10413-471: The laboratory under outer space conditions, using starter chemicals such as pyrimidine , an organic compound commonly found in meteorites . Pyrimidine , like polycyclic aromatic hydrocarbons (PAHs), is one of the most carbon-rich compounds found in the universe and may have been formed in red giants or in interstellar dust and gas clouds. In July 2022, astronomers reported massive amounts of prebiotic molecules , including possible RNA precursors, in

10530-451: The latter case, increasing the polymer chain length 10-fold would increase the viscosity over 1000 times. Increasing chain length furthermore tends to decrease chain mobility, increase strength and toughness, and increase the glass-transition temperature (T g ). This is a result of the increase in chain interactions such as van der Waals attractions and entanglements that come with increased chain length. These interactions tend to fix

10647-436: The length (or equivalently, the molecular weight) of the polymer chain. One important example of the physical consequences of the molecular weight is the scaling of the viscosity (resistance to flow) in the melt. The influence of the weight-average molecular weight ( M w {\displaystyle M_{w}} ) on the melt viscosity ( η {\displaystyle \eta } ) depends on whether

10764-417: The load is removed. Dynamic mechanical analysis or DMA measures this complex modulus by oscillating the load and measuring the resulting strain as a function of time. Transport properties such as diffusivity describe how rapidly molecules move through the polymer matrix. These are very important in many applications of polymers for films and membranes. The movement of individual macromolecules occurs by

10881-436: The market. Many commercially important polymers are synthesized by chemical modification of naturally occurring polymers. Prominent examples include the reaction of nitric acid and cellulose to form nitrocellulose and the formation of vulcanized rubber by heating natural rubber in the presence of sulfur . Ways in which polymers can be modified include oxidation , cross-linking , and end-capping . The structure of

10998-413: The material will endure before failure. This is very important in applications that rely upon a polymer's physical strength or durability. For example, a rubber band with a higher tensile strength will hold a greater weight before snapping. In general, tensile strength increases with polymer chain length and crosslinking of polymer chains. Young's modulus quantifies the elasticity of the polymer. It

11115-425: The nucleotide modification. rRNAs and tRNAs are extensively modified, but snRNAs and mRNAs can also be the target of base modification. RNA can also be methylated. Like DNA, RNA can carry genetic information. RNA viruses have genomes composed of RNA that encodes a number of proteins. The viral genome is replicated by some of those proteins, while other proteins protect the genome as the virus particle moves to

11232-444: The number of particles (or moles) being mixed. Since polymeric molecules are much larger and hence generally have much higher specific volumes than small molecules, the number of molecules involved in a polymeric mixture is far smaller than the number in a small molecule mixture of equal volume. The energetics of mixing, on the other hand, is comparable on a per volume basis for polymeric and small molecule mixtures. This tends to increase

11349-719: The partially negatively charged oxygen atoms in C=O groups on another. These strong hydrogen bonds, for example, result in the high tensile strength and melting point of polymers containing urethane or urea linkages. Polyesters have dipole-dipole bonding between the oxygen atoms in C=O groups and the hydrogen atoms in H-C groups. Dipole bonding is not as strong as hydrogen bonding, so a polyester's melting point and strength are lower than Kevlar 's ( Twaron ), but polyesters have greater flexibility. Polymers with non-polar units such as polyethylene interact only through weak Van der Waals forces . As

11466-422: The physical arrangement of monomer residues along the backbone of the chain. These are the elements of polymer structure that require the breaking of a covalent bond in order to change. Various polymer structures can be produced depending on the monomers and reaction conditions: A polymer may consist of linear macromolecules containing each only one unbranched chain. In the case of unbranched polyethylene, this chain

11583-686: The physiological state. Bacterial small RNAs generally act via antisense pairing with mRNA to down-regulate its translation, either by affecting stability or affecting cis-binding ability. Riboswitches have also been discovered. They are cis-acting regulatory RNA sequences acting allosterically . They change shape when they bind metabolites so that they gain or lose the ability to bind chromatin to regulate expression of genes. Archaea also have systems of regulatory RNA. The CRISPR system, recently being used to edit DNA in situ , acts via regulatory RNAs in archaea and bacteria to provide protection against virus invaders. Synthesis of RNA typically occurs in

11700-399: The polymer and create gaps between polymer chains for greater mobility and fewer interchain interactions. A good example of the action of plasticizers is related to polyvinylchlorides or PVCs. A uPVC, or unplasticized polyvinylchloride, is used for things such as pipes. A pipe has no plasticizers in it, because it needs to remain strong and heat-resistant. Plasticized PVC is used in clothing for

11817-426: The polymer at the scale of a single chain. The microstructure determines the possibility for the polymer to form phases with different arrangements, for example through crystallization , the glass transition or microphase separation . These features play a major role in determining the physical and chemical properties of a polymer. The identity of the repeat units (monomer residues, also known as "mers") comprising

11934-543: The polymer can lend the polymer to ionic bonding or hydrogen bonding between its own chains. These stronger forces typically result in higher tensile strength and higher crystalline melting points. The intermolecular forces in polymers can be affected by dipoles in the monomer units. Polymers containing amide or carbonyl groups can form hydrogen bonds between adjacent chains; the partially positively charged hydrogen atoms in N-H groups of one chain are strongly attracted to

12051-403: The polymer is above or below the onset of entanglements . Below the entanglement molecular weight , η ∼ M w 1 {\displaystyle \eta \sim {M_{w}}^{1}} , whereas above the entanglement molecular weight, η ∼ M w 3.4 {\displaystyle \eta \sim {M_{w}}^{3.4}} . In

12168-583: The polymerization of PET polyester . The monomers are terephthalic acid (HOOC—C 6 H 4 —COOH) and ethylene glycol (HO—CH 2 —CH 2 —OH) but the repeating unit is —OC—C 6 H 4 —COO—CH 2 —CH 2 —O—, which corresponds to the combination of the two monomers with the loss of two water molecules. The distinct piece of each monomer that is incorporated into the polymer is known as a repeat unit or monomer residue. Synthetic methods are generally divided into two categories, step-growth polymerization and chain polymerization . The essential difference between

12285-403: The post-transcriptional modifications occur in highly functional regions, such as the peptidyl transferase center and the subunit interface, implying that they are important for normal function. Messenger RNA (mRNA) is the type of RNA that carries information from DNA to the ribosome , the sites of protein synthesis ( translation ) in the cell cytoplasm. The coding sequence of the mRNA determines

12402-921: The process of translation. There are also non-coding RNAs involved in gene regulation, RNA processing and other roles. Certain RNAs are able to catalyse chemical reactions such as cutting and ligating other RNA molecules, and the catalysis of peptide bond formation in the ribosome ; these are known as ribozymes . According to the length of RNA chain, RNA includes small RNA and long RNA. Usually, small RNAs are shorter than 200  nt in length, and long RNAs are greater than 200  nt long. Long RNAs, also called large RNAs, mainly include long non-coding RNA (lncRNA) and mRNA . Small RNAs mainly include 5.8S ribosomal RNA (rRNA), 5S rRNA , transfer RNA (tRNA), microRNA (miRNA), small interfering RNA (siRNA), small nucleolar RNA (snoRNAs), Piwi-interacting RNA (piRNA), tRNA-derived small RNA (tsRNA) and small rDNA-derived RNA (srRNA). There are certain exceptions as in

12519-510: The ribosome—an RNA-protein complex that catalyzes the assembly of proteins—revealed that its active site is composed entirely of RNA. An important structural component of RNA that distinguishes it from DNA is the presence of a hydroxyl group at the 2' position of the ribose sugar . The presence of this functional group causes the helix to mostly take the A-form geometry , although in single strand dinucleotide contexts, RNA can rarely also adopt

12636-437: The same side), atactic (random placement of substituents), and syndiotactic (alternating placement of substituents). Polymer morphology generally describes the arrangement and microscale ordering of polymer chains in space. The macroscopic physical properties of a polymer are related to the interactions between the polymer chains. When applied to polymers, the term crystalline has a somewhat ambiguous usage. In some cases,

12753-512: The size of individual polymer coils in solution. A variety of techniques may be employed for the synthesis of a polymeric material with a range of architectures, for example living polymerization . A common means of expressing the length of a chain is the degree of polymerization , which quantifies the number of monomers incorporated into the chain. As with other molecules, a polymer's size may also be expressed in terms of molecular weight . Since synthetic polymerization techniques typically yield

12870-448: The states is known as a coil–globule transition . Inclusion of plasticizers tends to lower T g and increase polymer flexibility. Addition of the plasticizer will also modify dependence of the glass-transition temperature T g on the cooling rate. The mobility of the chain can further change if the molecules of plasticizer give rise to hydrogen bonding formation. Plasticizers are generally small molecules that are chemically similar to

12987-686: The term crystalline finds identical usage to that used in conventional crystallography . For example, the structure of a crystalline protein or polynucleotide, such as a sample prepared for x-ray crystallography , may be defined in terms of a conventional unit cell composed of one or more polymer molecules with cell dimensions of hundreds of angstroms or more. A synthetic polymer may be loosely described as crystalline if it contains regions of three-dimensional ordering on atomic (rather than macromolecular) length scales, usually arising from intramolecular folding or stacking of adjacent chains. Synthetic polymers may consist of both crystalline and amorphous regions;

13104-555: The two is that in chain polymerization, monomers are added to the chain one at a time only, such as in polystyrene , whereas in step-growth polymerization chains of monomers may combine with one another directly, such as in polyester . Step-growth polymerization can be divided into polycondensation , in which low-molar-mass by-product is formed in every reaction step, and polyaddition . Newer methods, such as plasma polymerization do not fit neatly into either category. Synthetic polymerization reactions may be carried out with or without

13221-422: The usual route for transmission of genetic information). For this work, David Baltimore , Renato Dulbecco and Howard Temin were awarded a Nobel Prize in 1975. In 1976, Walter Fiers and his team determined the first complete nucleotide sequence of an RNA virus genome, that of bacteriophage MS2 . In 1977, introns and RNA splicing were discovered in both mammalian viruses and in cellular genes, resulting in

13338-563: Was awarded for the elucidation of the atomic structure of the ribosome to Venki Ramakrishnan , Thomas A. Steitz , and Ada Yonath . In 2023 the Nobel Prize in Physiology or Medicine was awarded to Katalin Karikó and Drew Weissman for their discoveries concerning modified nucleosides that enabled the development of effective mRNA vaccines against COVID-19. In 1968, Carl Woese hypothesized that RNA might be catalytic and suggested that

13455-605: Was coined in 1833 by Jöns Jacob Berzelius , though with a definition distinct from the modern IUPAC definition. The modern concept of polymers as covalently bonded macromolecular structures was proposed in 1920 by Hermann Staudinger , who spent the next decade finding experimental evidence for this hypothesis. Polymers are of two types: naturally occurring and synthetic or man made . Natural polymeric materials such as hemp , shellac , amber , wool , silk , and natural rubber have been used for centuries. A variety of other natural polymers exist, such as cellulose , which

13572-550: Was the first evidence for OH in the atmosphere of any planet other than Earth's. In 2013, OH near-infrared spectra were observed in the night glow in the polar winter atmosphere of Mars by use of the Compact Reconnaissance Imaging Spectrometer for Mars (CRISM). In 2021, evidence for OH in the dayside atmosphere of the exoplanet WASP-33b was found in its emission spectrum at wavelengths between 1 and 2 micrometers. Evidence for OH in

13689-403: Was thought to be a eukaryotic phenomenon, a part of the explanation for why so much more transcription in higher organisms was seen than had been predicted. But as soon as researchers began to look for possible RNA regulators in bacteria, they turned up there as well, termed as small RNA (sRNA). Currently, the ubiquitous nature of systems of RNA regulation of genes has been discussed as support for

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